In Vim you can disable undo:
setlocal ul=-1
That's it, excellent advice. I now changed script to turn off "undolevels" and after search/replace commands finish the I turn "undolevels" back on.
:setl ul=-1
commands
:setl ul=-123456
:setl ul=-1
commands
:setl ul=-123456
This reduced memory consumption from several GB to 10 MB in my case.
Thanks a lot for help.
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